STRINGSTRING
Solyc01g100670.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g100670.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g100670.1.1Uncharacterized protein (164 aa)    
Predicted Functional Partners:
Solyc09g098230.2.1
Uncharacterized protein (624 aa)
     
 
  0.725
Solyc03g118320.1.1
Uncharacterized protein (583 aa)
       
 
  0.716
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
  0.637
Solyc09g009340.1.1
Uncharacterized protein (731 aa)
       
  0.584
Solyc09g018710.2.1
Uncharacterized protein (410 aa)
     
  0.574
Solyc09g018690.2.1
Uncharacterized protein (507 aa)
     
  0.574
Solyc08g074610.1.1
Uncharacterized protein (550 aa)
     
  0.574
Solyc07g042010.2.1
Uncharacterized protein (685 aa)
     
  0.574
Solyc05g014690.1.1
Uncharacterized protein (1002 aa)
     
  0.574
Solyc02g088430.1.1
Uncharacterized protein (541 aa)
     
  0.574
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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