STRINGSTRING
Solyc01g100810.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g100810.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g100810.2.1Uncharacterized protein (653 aa)    
Predicted Functional Partners:
Solyc01g068620.2.1
Uncharacterized protein (290 aa)
   
          0.481
Solyc09g008480.2.1
Uncharacterized protein (813 aa)
       
 
  0.457
Solyc07g049230.1.1
Uncharacterized protein (143 aa)
   
          0.432
Solyc12g019880.1.1
Uncharacterized protein (754 aa)
       
 
  0.421
Solyc11g013180.1.1
Uncharacterized protein (818 aa)
       
 
  0.421
Solyc10g086320.1.1
Uncharacterized protein (789 aa)
       
 
  0.421
Solyc10g078460.1.1
Uncharacterized protein (763 aa)
       
 
  0.421
Solyc04g015470.2.1
Uncharacterized protein (749 aa)
       
 
  0.421
Solyc01g104140.2.1
Uncharacterized protein (774 aa)
       
 
  0.421
Solyc01g096410.2.1
Uncharacterized protein (779 aa)
       
 
  0.421
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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