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101259291 protein (Solanum lycopersicum) - STRING interaction network
"101259291" - Pectin lyase-like superfamily protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101259291Pectin lyase-like superfamily protein (476 aa)    
Predicted Functional Partners:
Solyc03g051770.2.1
Pectin lyase-like superfamily protein; Belongs to the glycosyl hydrolase 28 family (315 aa)
   
     
  0.552
Solyc12g044750.1.1
Pectin lyase-like superfamily protein (382 aa)
         
  0.508
101260795
Pectinesterase; Pectin lyase-like superfamily protein (378 aa)
   
   
  0.456
104645850
annotation not available (362 aa)
   
   
  0.446
Solyc11g008140.1.1
annotation not available (449 aa)
         
  0.426
101257697
Pectin lyase-like superfamily protein (483 aa)
         
  0.426
101264933
annotation not available (494 aa)
         
  0.426
101260911
annotation not available (504 aa)
         
  0.426
Solyc09g005850.2.1
annotation not available (326 aa)
         
  0.410
101267397
Pectin lyase-like superfamily protein (336 aa)
         
  0.410
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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