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Solyc01g102370.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g102370.2.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Solyc01g102370.2.1Uncharacterized protein ; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts [...] (382 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
  0.992
Solyc02g091120.2.1
DNA ligase (1473 aa)
     
  0.978
Solyc09g009340.1.1
Uncharacterized protein (731 aa)
   
  0.975
MSH2
Mismatch repair protein ; Component of the post-replicative DNA mismatch repair system (MMR) (943 aa)
   
  0.969
Solyc01g088380.1.1
Uncharacterized protein (1428 aa)
   
  0.961
Solyc00g029080.1.1
Annotation not available (956 aa)
   
  0.961
Solyc11g012820.1.1
Uncharacterized protein (339 aa)
   
  0.948
Solyc03g111680.2.1
Uncharacterized protein (1020 aa)
   
 
  0.941
Solyc02g072090.1.1
Uncharacterized protein (1213 aa)
   
 
  0.941
Solyc07g042790.1.1
Uncharacterized protein (1452 aa)
     
  0.935
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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