Solyc01g102550.2.1 protein (Solanum lycopersicum)

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Predicted Interactions

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Your Input:			Neighborhood	Gene Fusion	Cooccurence	Coexpression	Experiments	Databases	Textmining	[Homology]	Score
	Solyc01g102550.2.1	annotation not available (406 aa)
Predicted Functional Partners:
	Solyc12g049410.1.1	Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- transport; LOCATED IN- nuclear pore; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Nuclear pore protein 84/107 (InterPro-IPR007252); Has 5399 /.../ hits to 5001 proteins in 612 species- Archae - 19; Bacteria - 730; Metazoa - 2186; Fungi - 823; Plants - 382; Viruses - 37; Other Eukaryotes - 1222 (source- NCBI BLink) (1016 aa)									0.990
	101246938	Uncharacterized protein; Nucleoporin 155 (1481 aa)									0.987
	101257847	annotation not available (301 aa)									0.929
	101265789	annotation not available (302 aa)									0.929
	101253512	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink) (719 aa)									0.922
	GATC	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln); Belongs to the GatC family (140 aa)									0.922
	101260108	Uncharacterized protein; Embryo defective 3012 (1946 aa)									0.870
	101262406	annotation not available (862 aa)									0.844
	101261437	Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein; Belongs to the WD repeat SEC13 family (325 aa)									0.828
	101260798	Protein of unknown function (DUF3414) (1874 aa)									0.822

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
101246938	101253512	Solyc07g008160.2.1	Solyc08g066580.2.1	Uncharacterized protein; Nucleoporin 155	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink)	0.958
101246938	101257847	Solyc07g008160.2.1	Solyc03g120900.1.1	Uncharacterized protein; Nucleoporin 155	annotation not available	0.952
101246938	101260108	Solyc07g008160.2.1	Solyc02g070810.2.1	Uncharacterized protein; Nucleoporin 155	Uncharacterized protein; Embryo defective 3012	0.876
101246938	101260798	Solyc07g008160.2.1	Solyc12g006480.1.1	Uncharacterized protein; Nucleoporin 155	Protein of unknown function (DUF3414)	0.997
101246938	101261437	Solyc07g008160.2.1	Solyc08g082100.2.1	Uncharacterized protein; Nucleoporin 155	Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein; Belongs to the WD repeat SEC13 family	0.887
101246938	101262406	Solyc07g008160.2.1	Solyc04g016240.2.1	Uncharacterized protein; Nucleoporin 155	annotation not available	0.997
101246938	101265789	Solyc07g008160.2.1	Solyc02g087300.1.1	Uncharacterized protein; Nucleoporin 155	annotation not available	0.952
101246938	GATC	Solyc07g008160.2.1	Solyc07g063140.1.1	Uncharacterized protein; Nucleoporin 155	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln); Belongs to the GatC family	0.958
101246938	Solyc01g102550.2.1	Solyc07g008160.2.1	Solyc01g102550.2.1	Uncharacterized protein; Nucleoporin 155	annotation not available	0.987
101246938	Solyc12g049410.1.1	Solyc07g008160.2.1	Solyc12g049410.1.1	Uncharacterized protein; Nucleoporin 155	Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- transport; LOCATED IN- nuclear pore; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Nuclear pore protein 84/107 (InterPro-IPR007252); Has 5399 /.../ hits to 5001 proteins in 612 species- Archae - 19; Bacteria - 730; Metazoa - 2186; Fungi - 823; Plants - 382; Viruses - 37; Other Eukaryotes - 1222 (source- NCBI BLink)	0.997
101253512	101246938	Solyc08g066580.2.1	Solyc07g008160.2.1	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink)	Uncharacterized protein; Nucleoporin 155	0.958
101253512	101257847	Solyc08g066580.2.1	Solyc03g120900.1.1	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink)	annotation not available	0.954
101253512	101260108	Solyc08g066580.2.1	Solyc02g070810.2.1	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink)	Uncharacterized protein; Embryo defective 3012	0.683
101253512	101260798	Solyc08g066580.2.1	Solyc12g006480.1.1	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink)	Protein of unknown function (DUF3414)	0.896
101253512	101261437	Solyc08g066580.2.1	Solyc08g082100.2.1	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink)	Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein; Belongs to the WD repeat SEC13 family	0.993
101253512	101262406	Solyc08g066580.2.1	Solyc04g016240.2.1	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink)	annotation not available	0.771
101253512	101265789	Solyc08g066580.2.1	Solyc02g087300.1.1	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink)	annotation not available	0.954
101253512	Solyc01g102550.2.1	Solyc08g066580.2.1	Solyc01g102550.2.1	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink)	annotation not available	0.922
101253512	Solyc12g049410.1.1	Solyc08g066580.2.1	Solyc12g049410.1.1	Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro-IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Ot /.../karyotes - 2996 (source- NCBI BLink)	Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- transport; LOCATED IN- nuclear pore; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Nuclear pore protein 84/107 (InterPro-IPR007252); Has 5399 /.../ hits to 5001 proteins in 612 species- Archae - 19; Bacteria - 730; Metazoa - 2186; Fungi - 823; Plants - 382; Viruses - 37; Other Eukaryotes - 1222 (source- NCBI BLink)	0.998
101257847	101246938	Solyc03g120900.1.1	Solyc07g008160.2.1	annotation not available	Uncharacterized protein; Nucleoporin 155	0.952

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