Solyc01g102550.2.1 protein (Solanum lycopersicum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

co-expression

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Score

Solyc01g102550.2.1

Uncharacterized protein (406 aa)

Predicted Functional Partners:

Solyc08g082100.2.1

0.983

Solyc08g066580.2.1

0.978

Solyc07g063140.1.1

0.978

Solyc03g120900.1.1

0.972

Solyc02g087300.1.1

0.972

Solyc12g049410.1.1

0.926

Solyc05g055110.2.1

0.908

Solyc04g007280.2.1

0.908

Solyc03g117120.2.1

0.908

Solyc02g093330.2.1

0.908

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Solyc01g102550.2.1	Solyc02g087300.1.1	Uncharacterized protein	Uncharacterized protein	0.972
Solyc01g102550.2.1	Solyc02g093330.2.1	Uncharacterized protein	Uncharacterized protein	0.908
Solyc01g102550.2.1	Solyc03g117120.2.1	Uncharacterized protein	Uncharacterized protein	0.908
Solyc01g102550.2.1	Solyc03g120900.1.1	Uncharacterized protein	Uncharacterized protein	0.972
Solyc01g102550.2.1	Solyc04g007280.2.1	Uncharacterized protein	Uncharacterized protein	0.908
Solyc01g102550.2.1	Solyc05g055110.2.1	Uncharacterized protein	Uncharacterized protein	0.908
Solyc01g102550.2.1	Solyc07g063140.1.1	Uncharacterized protein	Uncharacterized protein	0.978
Solyc01g102550.2.1	Solyc08g066580.2.1	Uncharacterized protein	Uncharacterized protein	0.978
Solyc01g102550.2.1	Solyc08g082100.2.1	Uncharacterized protein	Uncharacterized protein	0.983
Solyc01g102550.2.1	Solyc12g049410.1.1	Uncharacterized protein	Uncharacterized protein	0.926
Solyc02g087300.1.1	Solyc01g102550.2.1	Uncharacterized protein	Uncharacterized protein	0.972
Solyc02g087300.1.1	Solyc02g093330.2.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc02g087300.1.1	Solyc03g117120.2.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc02g087300.1.1	Solyc03g120900.1.1	Uncharacterized protein	Uncharacterized protein	0.801
Solyc02g087300.1.1	Solyc04g007280.2.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc02g087300.1.1	Solyc05g055110.2.1	Uncharacterized protein	Uncharacterized protein	0.972
Solyc02g087300.1.1	Solyc07g063140.1.1	Uncharacterized protein	Uncharacterized protein	0.981
Solyc02g087300.1.1	Solyc08g066580.2.1	Uncharacterized protein	Uncharacterized protein	0.981
Solyc02g087300.1.1	Solyc08g082100.2.1	Uncharacterized protein	Uncharacterized protein	0.979
Solyc02g087300.1.1	Solyc12g049410.1.1	Uncharacterized protein	Uncharacterized protein	0.987

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