STRINGSTRING
Solyc01g102800.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g102800.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g102800.2.1Uncharacterized protein (880 aa)    
Predicted Functional Partners:
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
   
  0.868
Solyc03g095840.2.1
Uncharacterized protein (344 aa)
     
  0.865
Solyc01g103750.2.1
Uncharacterized protein (394 aa)
   
 
  0.806
Solyc03g119280.2.1
Uncharacterized protein (504 aa)
         
 
0.800
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
 
 
  0.753
Solyc07g064810.2.1
Uncharacterized protein (588 aa)
   
   
  0.738
Solyc04g050520.2.1
Uncharacterized protein (1340 aa)
     
 
  0.717
Solyc04g050510.2.1
Uncharacterized protein (1314 aa)
     
 
  0.717
Solyc02g080980.2.1
Uncharacterized protein (425 aa)
   
   
  0.710
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
   
   
  0.708
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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