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STRINGSTRING
101251038 protein (Solanum lycopersicum) - STRING interaction network
"101251038" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101251038Uncharacterized protein; Class II aaRS and biotin synthetases superfamily protein (880 aa)    
Predicted Functional Partners:
101263723
Uncharacterized protein; methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; Belongs to the class-I aminoacyl-tRNA synthetase family (812 aa)
   
 
  0.969
Solyc01g109360.2.1
annotation not available (328 aa)
   
   
  0.954
Solyc01g008310.2.1
tRNA synthetase beta subunit family protein (576 aa)
   
   
  0.941
RBR1
Retinoblastoma-related protein 1 (1018 aa)
       
 
  0.915
101257451
annotation not available (344 aa)
     
 
  0.904
101267619
Uncharacterized protein; 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain (386 aa)
     
      0.899
101244420
Uncharacterized protein; Glutamyl/glutaminyl-tRNA synthetase, class Ic; Belongs to the class-I aminoacyl-tRNA synthetase family (740 aa)
     
 
  0.895
101254120
annotation not available (606 aa)
     
      0.889
Solyc07g008340.2.1
annotation not available (578 aa)
     
      0.889
101245392
annotation not available (893 aa)
     
        0.868
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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