STRINGSTRING
Solyc01g103110.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g103110.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g103110.2.1Uncharacterized protein (466 aa)    
Predicted Functional Partners:
Solyc08g082830.2.1
Uncharacterized protein (731 aa)
   
        0.466
Solyc10g085390.1.1
Uncharacterized protein (588 aa)
           
  0.459
Solyc08g066530.2.1
Uncharacterized protein (269 aa)
           
  0.459
Solyc06g068690.2.1
Uncharacterized protein (582 aa)
           
  0.459
Solyc03g118030.2.1
Uncharacterized protein (624 aa)
           
  0.459
Solyc03g025990.1.1
Uncharacterized protein (203 aa)
           
  0.459
Solyc03g006230.1.1
Uncharacterized protein (563 aa)
           
  0.459
Solyc08g014480.2.1
Uncharacterized protein (1110 aa)
           
  0.459
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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