STRINGSTRING
Solyc01g103680.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g103680.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g103680.2.1Uncharacterized protein (500 aa)    
Predicted Functional Partners:
Solyc03g116730.2.1
Uncharacterized protein (387 aa)
       
      0.504
Solyc12g008470.1.1
Uncharacterized protein (84 aa)
       
      0.487
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
       
      0.487
Solyc09g061230.2.1
Uncharacterized protein (133 aa)
       
      0.487
Solyc06g083440.2.1
Uncharacterized protein (133 aa)
       
      0.487
Solyc06g007930.2.1
Uncharacterized protein (135 aa)
       
      0.487
CB5-B
Cytochrome b5 isoform B (133 aa)
       
      0.487
Solyc04g078140.2.1
Uncharacterized protein (148 aa)
       
      0.487
CB5-A
Cytochrome b5 isoform A (190 aa)
       
      0.487
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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