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STRINGSTRING
Solyc01g103720.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g103720.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g103720.2.1annotation not available (99 aa)    
Predicted Functional Partners:
101257580
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (603 aa)
     
 
  0.995
101259142
annotation not available (312 aa)
     
 
  0.994
101265348
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- rRNA processing; LOCATED IN- preribosome, small subunit precursor; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Nucleolar, Nop52 (InterPro-I /.../01); Has 543 Blast hits to 530 proteins in 201 species- Archae - 0; Bacteria - 10; Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other Eukaryotes - 112 (source- NCBI BLink) (589 aa)
     
 
  0.993
101245343
annotation not available (566 aa)
     
 
  0.993
101249690
Ribosomal protein L24e family protein (166 aa)
     
 
  0.993
Solyc02g088780.2.1
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (423 aa)
     
 
  0.992
Solyc01g111030.1.1
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (470 aa)
     
 
  0.992
101257709
Ribosomal protein S8e family protein (260 aa)
     
 
  0.992
Solyc11g066630.1.1
annotation not available (145 aa)
     
 
  0.992
Solyc06g074720.2.1
annotation not available (219 aa)
     
 
  0.992
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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