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STRINGSTRING
101247564 protein (Solanum lycopersicum) - STRING interaction network
"101247564" - Ubiquitin family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101247564Ubiquitin family protein (330 aa)    
Predicted Functional Partners:
101267617
annotation not available (444 aa)
     
 
  0.995
101267619
Uncharacterized protein; 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain (386 aa)
     
 
  0.995
101267337
annotation not available (310 aa)
     
 
  0.995
101257034
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family (248 aa)
     
 
  0.994
101249287
annotation not available (267 aa)
     
 
  0.994
101258750
Uncharacterized protein; Proteasome regulatory particle subunit (423 aa)
     
 
  0.994
Solyc03g033430.1.1
annotation not available (170 aa)
     
 
  0.993
101263071
annotation not available (403 aa)
     
 
  0.993
101262927
annotation not available (429 aa)
     
 
  0.993
101268371
Uncharacterized protein; Regulatory particle triple-A 1A; Belongs to the AAA ATPase family (428 aa)
     
 
  0.993
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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