STRINGSTRING
Solyc01g103930.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g103930.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g103930.2.1Uncharacterized protein (588 aa)    
Predicted Functional Partners:
COP1
COP1 homolog (677 aa)
       
      0.602
Solyc11g066260.1.1
Uncharacterized protein (220 aa)
       
  0.525
Solyc06g074840.2.1
Uncharacterized protein (222 aa)
       
  0.525
Solyc08g075440.2.1
Uncharacterized protein (691 aa)
     
   
  0.519
Solyc12g009060.1.1
Uncharacterized protein (223 aa)
     
  0.516
Solyc06g008290.2.1
Uncharacterized protein (88 aa)
     
  0.516
Solyc06g008280.2.1
Uncharacterized protein (99 aa)
     
  0.516
Solyc02g069680.2.1
Uncharacterized protein (222 aa)
     
  0.516
Solyc03g120700.2.1
Uncharacterized protein (1073 aa)
     
   
  0.513
Solyc12g096650.1.1
Uncharacterized protein (227 aa)
       
  0.484
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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