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STRINGSTRING
Solyc01g104320.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g104320.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g104320.2.1annotation not available (284 aa)    
Predicted Functional Partners:
101268326
Plastid-lipid associated protein PAP / fibrillin family protein (206 aa)
   
     
  0.868
101263925
Uncharacterized protein; Tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) (498 aa)
   
   
  0.688
101243810
Protein kinase superfamily protein (662 aa)
     
   
  0.687
Solyc06g064560.2.1
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- RuvA domain 2-like (InterPro-IPR010994); Has 29 Blast hits to 29 proteins in 9 species- Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (245 aa)
           
  0.687
Solyc01g098110.2.1
Esterase/lipase/thioesterase family protein (678 aa)
           
  0.656
101248385
Protein kinase superfamily protein (714 aa)
     
   
  0.610
101248189
Uncharacterized protein; ABC2 homolog 13 (754 aa)
     
   
  0.568
Solyc07g045420.2.1
Protein kinase superfamily protein (699 aa)
     
   
  0.518
Solyc04g008440.1.1
annotation not available (317 aa)
           
  0.467
101261866
CLP protease proteolytic subunit 3 (309 aa)
           
  0.452
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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