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STRINGSTRING
LOC778262 protein (Solanum lycopersicum) - STRING interaction network
"LOC778262" - Green ripe in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC778262Green ripe (243 aa)    
Predicted Functional Partners:
Never-ripe
Ethylene receptor; Ethylene receptor neverripe (635 aa)
       
  0.966
ETR1
Ethylene receptor 1; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway (754 aa)
       
  0.912
ETR2
Ethylene receptor 2; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway (736 aa)
       
  0.890
LOC778265
Green ripe-like 2 (231 aa)
     
 
0.821
LOC778264
Green ripe-like 1 (243 aa)
         
0.807
ETR6
Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway (754 aa)
       
  0.796
CTR4
CTR1-like protein kinase (793 aa)
     
   
  0.678
CTR3
CTR1-like protein kinase (837 aa)
     
   
  0.678
EIN2
Ethylene signaling protein (1316 aa)
           
  0.674
ETR5
Ethylene receptor; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway (767 aa)
       
  0.667
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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