STRINGSTRING
Solyc01g104490.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g104490.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g104490.2.1Uncharacterized protein (2128 aa)    
Predicted Functional Partners:
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
     
 
  0.988
Solyc06g083870.2.1
SMC1 (1218 aa)
     
  0.974
Solyc12g014320.1.1
Uncharacterized protein (551 aa)
     
  0.970
Solyc03g113740.2.1
Uncharacterized protein (576 aa)
     
  0.965
Solyc02g062680.2.1
Anaphase-promoting complex subunit 10 ; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (191 aa)
     
  0.965
Solyc02g079050.2.1
Uncharacterized protein (769 aa)
     
  0.954
Solyc02g078640.2.1
Uncharacterized protein (2023 aa)
     
  0.948
Solyc11g013240.1.1
Uncharacterized protein (741 aa)
     
 
  0.944
Solyc01g104570.2.1
Uncharacterized protein (577 aa)
     
 
  0.915
Solyc01g104520.1.1
Uncharacterized protein (169 aa)
     
 
  0.915
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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