Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Uncharacterized protein; Homolog of separase (2128 aa)
Predicted Functional Partners:
Structural maintenance of chromosomes protein; SMC1 (1218 aa)
Structural maintenance of chromosomes protein; SMC3 (1229 aa)
Putative protein kinase 1 (741 aa)
Structural maintenance of chromosome 3 (1246 aa)
annotation not available (532 aa)
Uncharacterized protein; Structural maintenance of chromosomes 5 (1050 aa)
ATP binding;protein kinases;protein serine/threonine kinases (529 aa)
Sister chromatid cohesion protein; PHD finger family protein (1620 aa)
annotation not available (86 aa)
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (191 aa)
Your Current Organism:
NCBI taxonomy Id: 4081 Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato