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STRINGSTRING
Solyc01g104520.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g104520.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g104520.1.1annotation not available (169 aa)    
Predicted Functional Partners:
101265872
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- mitosis; LOCATED IN- plasma membrane; EXPRESSED IN- cultured cell; CONTAINS InterPro DOMAIN/s- Kinetochore protein Nuf2 (InterPro-IPR005549); Has 50972 Blast hits to 29793 proteins in 2070 speci /.../chae - 902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156; Plants - 2312; Viruses - 158; Other Eukaryotes - 12412 (source- NCBI BLink) (453 aa)
     
 
  0.992
Solyc04g026270.2.1
annotation not available (271 aa)
     
 
  0.992
101260147
annotation not available (314 aa)
     
 
  0.992
Solyc03g112550.2.1
annotation not available (316 aa)
     
 
  0.992
101265455
ATP binding;protein kinases;protein serine/threonine kinases (529 aa)
     
 
  0.988
Solyc06g051040.2.1
Uncharacterized protein; Mad3/BUB1 homology region 1 (588 aa)
     
 
  0.988
101246051
Uncharacterized protein; BUB1-related (BUB1- budding uninhibited by benzymidazol 1) (389 aa)
     
 
  0.988
Solyc11g013240.1.1
Putative protein kinase 1 (741 aa)
     
 
  0.988
101257469
DNA-binding HORMA family protein (208 aa)
     
 
  0.988
100134876
Structural maintenance of chromosomes protein; SMC1 (1218 aa)
     
 
  0.979
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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