STRINGSTRING
Solyc01g104560.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g104560.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g104560.2.1Uncharacterized protein (414 aa)    
Predicted Functional Partners:
Solyc03g119010.2.1
Uncharacterized protein (240 aa)
       
      0.900
Solyc05g047690.2.1
Uncharacterized protein (156 aa)
       
  0.814
Solyc11g005060.1.1
Uncharacterized protein (228 aa)
       
      0.720
Solyc09g008470.2.1
Uncharacterized protein (345 aa)
       
      0.720
Solyc03g093680.2.1
Mago nashi protein (151 aa)
     
 
  0.500
Solyc02g083470.2.1
Uncharacterized protein (768 aa)
     
        0.479
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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