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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101246968 protein (Solanum lycopersicum) - STRING interaction network
"101246968" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101246968annotation not available (639 aa)    
Predicted Functional Partners:
101251227
Thioredoxin superfamily protein (204 aa)
           
  0.759
101256485
annotation not available (341 aa)
     
   
  0.684
101265931
annotation not available (583 aa)
           
  0.664
Solyc01g006140.2.1
annotation not available (572 aa)
           
  0.664
101264799
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT4G37440.2); Has 77 Blast hits to 77 proteins in 14 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 4 (source /.../ BLink) (522 aa)
           
  0.608
Solyc01g104350.2.1
annotation not available (390 aa)
           
  0.608
Solyc12g096260.1.1
annotation not available (128 aa)
           
  0.583
Solyc12g049230.1.1
Kinase-related protein of unknown function (DUF1296) (789 aa)
           
  0.583
101253508
annotation not available (169 aa)
           
  0.583
101263750
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (533 aa)
           
  0.572
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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