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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc01g104920.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g104920.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g104920.2.1annotation not available (692 aa)    
Predicted Functional Partners:
Solyc10g074520.1.1
annotation not available (302 aa)
     
 
  0.923
Solyc10g074510.1.1
annotation not available (61 aa)
     
 
  0.923
101254952
annotation not available (620 aa)
     
 
  0.923
101266422
annotation not available (289 aa)
     
 
  0.917
Solyc05g052310.2.1
annotation not available (243 aa)
     
 
  0.917
101257479
annotation not available (306 aa)
     
 
  0.908
Solyc05g012520.2.1
Uncharacterized protein; Soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (248 aa)
     
 
  0.908
101265526
annotation not available (343 aa)
     
 
  0.908
101247381
annotation not available (303 aa)
     
 
  0.872
101262338
annotation not available (300 aa)
     
 
  0.872
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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