STRINGSTRING
Solyc01g104920.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g104920.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g104920.2.1Uncharacterized protein (692 aa)    
Predicted Functional Partners:
Solyc06g050770.2.1
Uncharacterized protein (289 aa)
     
  0.975
Solyc05g052310.2.1
Uncharacterized protein (243 aa)
     
  0.974
Solyc01g112150.2.1
Uncharacterized protein (620 aa)
     
  0.971
Solyc10g074520.1.1
Uncharacterized protein (302 aa)
     
  0.971
Solyc10g074510.1.1
Uncharacterized protein (61 aa)
     
  0.971
Solyc06g083620.2.1
Uncharacterized protein (444 aa)
   
0.939
Solyc06g063140.2.1
Uncharacterized protein (429 aa)
     
0.915
Solyc03g123730.2.1
Uncharacterized protein (428 aa)
     
0.915
Solyc08g082700.2.1
Uncharacterized protein (267 aa)
     
      0.911
Solyc08g067910.2.1
Uncharacterized protein (341 aa)
     
  0.911
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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