STRINGSTRING
Solyc01g104980.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g104980.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g104980.2.1Uncharacterized protein (475 aa)    
Predicted Functional Partners:
Solyc06g050350.2.1
Uncharacterized protein (519 aa)
           
  0.533
Solyc05g015930.2.1
Uncharacterized protein (1544 aa)
           
  0.533
Solyc05g015920.2.1
Uncharacterized protein (1561 aa)
           
  0.533
Solyc09g007310.2.1
Uncharacterized protein (1553 aa)
     
 
  0.498
Solyc09g047870.2.1
Uncharacterized protein (287 aa)
           
  0.489
Solyc10g055450.1.1
Uncharacterized protein (1846 aa)
         
  0.483
Solyc01g111530.2.1
Uncharacterized protein (1860 aa)
         
  0.483
Solyc02g081660.2.1
Uncharacterized protein (440 aa)
           
  0.429
Solyc04g082410.2.1
Uncharacterized protein (322 aa)
     
 
  0.409
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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