STRINGSTRING
Solyc01g105400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g105400.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g105400.2.1Uncharacterized protein (117 aa)    
Predicted Functional Partners:
Solyc05g051530.2.1
Uncharacterized protein (530 aa)
 
  0.771
Solyc00g164680.1.1
Annotation not available (490 aa)
   
  0.692
Solyc12g044580.1.1
Uncharacterized protein (160 aa)
   
  0.613
Solyc12g044570.1.1
Uncharacterized protein (52 aa)
   
  0.613
Solyc09g042300.1.1
Uncharacterized protein (86 aa)
   
  0.613
Solyc09g042280.1.1
Uncharacterized protein (111 aa)
   
  0.613
Solyc06g036240.1.1
Uncharacterized protein (640 aa)
   
  0.613
Solyc04g076170.1.1
Uncharacterized protein (189 aa)
   
  0.613
Solyc02g055540.1.1
Uncharacterized protein (218 aa)
   
  0.613
Solyc02g055530.2.1
Uncharacterized protein (58 aa)
   
  0.613
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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