STRINGSTRING
Solyc01g105450.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g105450.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g105450.2.1Uncharacterized protein (627 aa)    
Predicted Functional Partners:
Solyc04g025180.2.1
Uncharacterized protein (115 aa)
   
  0.692
Solyc10g049480.1.1
Uncharacterized protein (461 aa)
   
0.668
Solyc04g006960.2.1
Uncharacterized protein (675 aa)
 
0.651
Solyc12g013640.1.1
Uncharacterized protein (630 aa)
 
0.651
Solyc12g013630.1.1
Uncharacterized protein (628 aa)
 
0.650
Solyc04g070970.2.1
Uncharacterized protein (722 aa)
 
0.649
Solyc08g005580.2.1
Uncharacterized protein (655 aa)
 
0.649
Solyc08g075430.2.1
Uncharacterized protein (646 aa)
 
0.647
Solyc01g006720.2.1
Uncharacterized protein (724 aa)
 
0.647
Solyc05g056470.1.1
Uncharacterized protein (614 aa)
 
0.646
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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