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STRINGSTRING
Solyc01g105800.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g105800.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g105800.2.1annotation not available (279 aa)    
Predicted Functional Partners:
101260878
GATA transcription factor; Transcriptional activator that specifically binds 5’- GATA-3’ or 5’-GAT-3’ motifs within gene promoters (325 aa)
       
 
  0.790
FALSIFLORA
FLORICAULA/LEAFY-like protein (429 aa)
       
 
  0.718
Solyc06g064840.2.1
annotation not available (201 aa)
           
  0.611
101265582
Uncharacterized protein; Receptor-like kinase in in flowers 3 (638 aa)
       
 
  0.518
101249977
annotation not available (174 aa)
       
 
  0.497
101265611
Leucine-rich repeat (LRR) family protein (517 aa)
           
  0.471
Solyc11g008650.1.1
annotation not available (73 aa)
       
 
  0.413
SP3D
SP3D (177 aa)
       
 
  0.413
Solyc08g066010.2.1
annotation not available (1529 aa)
       
 
  0.404
Solyc08g066000.1.1
annotation not available (423 aa)
       
 
  0.404
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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