• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101251931 protein (Solanum lycopersicum) - STRING interaction network
"101251931" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101251931annotation not available (326 aa)    
Predicted Functional Partners:
101254370
B-box type zinc finger protein with CCT domain (408 aa)
           
  0.797
101255179
annotation not available (275 aa)
           
  0.797
TDR6
TDR6 protein (225 aa)
       
 
  0.745
Solyc06g082160.2.1
SAGA-associated factor 11; CONTAINS InterPro DOMAIN/s- Sgf11, transcriptional regulation (InterPro-IPR013246); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 29 /.../urce- NCBI BLink) (336 aa)
       
      0.706
101244194
TIFY domain protein 8 (427 aa)
           
  0.691
104645911
Uncharacterized protein; Bromodomain transcription factor (280 aa)
       
 
  0.578
SAP1
A20/AN1-like zinc finger family protein (188 aa)
           
  0.553
csn5
CSN5 protein (367 aa)
       
      0.534
101256005
annotation not available (367 aa)
       
      0.534
Solyc03g007910.1.1
Protein kinase superfamily protein (385 aa)
       
 
  0.522
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (6%) [HD]