STRINGSTRING
Solyc01g106240.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g106240.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g106240.2.1Uncharacterized protein (1250 aa)    
Predicted Functional Partners:
Solyc03g116380.2.1
Uncharacterized protein (626 aa)
     
 
  0.978
Solyc02g030080.2.1
Uncharacterized protein (602 aa)
     
 
  0.978
POLR1B
Probable DNA-directed RNA polymerase I subunit RPA2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1096 aa)
     
 
  0.964
Solyc07g066410.2.1
Uncharacterized protein (810 aa)
     
 
  0.955
Solyc05g010480.2.1
Uncharacterized protein (396 aa)
     
 
  0.954
Solyc03g093480.2.1
Uncharacterized protein (2149 aa)
     
 
  0.954
Solyc10g039190.1.1
Uncharacterized protein (950 aa)
     
   
  0.951
Solyc09g018530.1.1
Uncharacterized protein (159 aa)
     
   
  0.951
Solyc09g018520.1.1
Uncharacterized protein (131 aa)
     
   
  0.951
Solyc03g097160.2.1
Uncharacterized protein (871 aa)
     
   
  0.949
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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