STRINGSTRING
Solyc01g106350.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g106350.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g106350.2.1Uncharacterized protein (600 aa)    
Predicted Functional Partners:
Solyc09g090840.2.1
Uncharacterized protein (576 aa)
 
  0.987
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
  0.809
Solyc01g106740.2.1
Uncharacterized protein (669 aa)
   
  0.754
Solyc01g112290.2.1
Uncharacterized protein (570 aa)
   
  0.748
Solyc01g102410.2.1
Uncharacterized protein (740 aa)
   
  0.727
Solyc05g009220.2.1
Uncharacterized protein (790 aa)
   
  0.719
ats1
Putative asparaginyl-tRNA synthetase (580 aa)
   
  0.664
Solyc09g057950.2.1
Uncharacterized protein (609 aa)
   
  0.664
Solyc03g019940.2.1
Uncharacterized protein (571 aa)
   
  0.664
Solyc00g030210.1.1
Annotation not available (1147 aa)
   
   
  0.663
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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