STRINGSTRING
Solyc01g106400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g106400.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g106400.2.1Uncharacterized protein (171 aa)    
Predicted Functional Partners:
Solyc02g063250.2.1
Uncharacterized protein (263 aa)
 
 
  0.918
MSRA3
Methionine sulfoxide reductase A3 (237 aa)
 
 
  0.918
E4
Peptide methionine sulfoxide reductase ; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine (By similarity) (196 aa)
 
 
  0.918
MSRA4
Methionine sulfoxide reductase A4 (257 aa)
 
 
  0.917
MSRA5
Methionine sulfoxide reductase A5 (252 aa)
 
 
  0.916
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
   
 
  0.810
Solyc04g016010.2.1
Uncharacterized protein (537 aa)
   
 
  0.810
Solyc10g007420.2.1
Uncharacterized protein (425 aa)
   
 
  0.705
Solyc10g007240.1.1
Uncharacterized protein (594 aa)
   
 
  0.705
Solyc10g007230.1.1
Uncharacterized protein (596 aa)
   
 
  0.705
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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