STRINGSTRING
Solyc01g106680.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g106680.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g106680.2.1Uncharacterized protein (524 aa)    
Predicted Functional Partners:
Solyc11g011140.1.1
Uncharacterized protein (188 aa)
           
  0.455
Solyc11g010240.1.1
Uncharacterized protein (594 aa)
           
  0.455
Solyc01g081030.2.1
Uncharacterized protein (618 aa)
           
  0.455
Solyc03g043850.2.1
Uncharacterized protein (89 aa)
           
  0.408
Solyc02g091880.2.1
Uncharacterized protein (100 aa)
           
  0.408
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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