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101259000 protein (Solanum lycopersicum) - STRING interaction network
"101259000" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101259000Uncharacterized protein; tRNA synthetase class II (D, K and N) family protein (669 aa)    
Predicted Functional Partners:
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily (576 aa)
 
 
  0.979
101260937
Uncharacterized protein; methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS); Belongs to the class-I aminoacyl-tRNA synthetase family (619 aa)
   
 
  0.964
101249760
Uncharacterized protein; tRNA synthetase class I (I, L, M and V) family protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1110 aa)
   
   
  0.936
101253854
Uncharacterized protein; tRNA synthetase class I (I, L, M and V) family protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1182 aa)
   
   
  0.899
101247918
annotation not available (544 aa)
   
0.893
101255211
Tyrosine--tRNA ligase; Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (521 aa)
   
   
  0.886
101247618
Uncharacterized protein; phenylalanyl-tRNA synthetase class IIc family protein (342 aa)
     
   
  0.858
101259201
Uncharacterized protein; Glutamate tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family (570 aa)
   
   
  0.851
101254321
Uncharacterized protein; YebC-related (325 aa)
   
   
  0.841
101250341
Uncharacterized protein; Class II aaRS and biotin synthetases superfamily protein (547 aa)
   
   
  0.837
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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