STRINGSTRING
Solyc01g106740.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g106740.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g106740.2.1Uncharacterized protein (669 aa)    
Predicted Functional Partners:
Solyc09g090840.2.1
Uncharacterized protein (576 aa)
 
  0.900
Solyc05g056250.2.1
Uncharacterized protein (544 aa)
   
0.843
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
 
  0.816
GATA
Glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial ; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln) (529 aa)
   
  0.772
Solyc01g090200.2.1
Uncharacterized protein (1061 aa)
   
   
  0.755
Solyc12g070090.1.1
Uncharacterized protein (216 aa)
   
  0.754
Solyc12g070080.1.1
Uncharacterized protein (149 aa)
   
  0.754
Solyc11g071550.1.1
Uncharacterized protein (506 aa)
   
  0.754
Solyc10g086170.1.1
Uncharacterized protein (426 aa)
   
  0.754
Solyc10g047300.1.1
Uncharacterized protein (598 aa)
   
  0.754
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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