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STRINGSTRING
101253436 protein (Solanum lycopersicum) - STRING interaction network
"101253436" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101253436annotation not available (784 aa)    
Predicted Functional Partners:
101255795
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 16 plant structures; EXPRESSED DURING- 9 growth stages; BEST Arabidopsis thaliana protein match is- unknown pr /.../(TAIR-AT5G01970.1); Has 3209 Blast hits to 2720 proteins in 308 species- Archae - 13; Bacteria - 213; Metazoa - 1207; Fungi - 247; Plants - 183; Viruses - 21; Other Eukaryotes - 1325 (source- NCBI BLink) (332 aa)
     
        0.877
101263895
Unknown protein; Has 25732 Blast hits to 16979 proteins in 961 species- Archae - 144; Bacteria - 1801; Metazoa - 12681; Fungi - 1868; Plants - 912; Viruses - 94; Other Eukaryotes - 8232 (source- NCBI BLink) (813 aa)
     
        0.876
101248633
End binding protein 1C (333 aa)
     
        0.876
101262334
annotation not available (499 aa)
     
        0.870
101268550
annotation not available (310 aa)
     
        0.869
101252290
Uncharacterized protein; Syntaxin of plants 111; Belongs to the syntaxin family (311 aa)
     
        0.869
101243777
annotation not available (295 aa)
     
        0.867
101245189
annotation not available (303 aa)
     
        0.867
101251596
annotation not available (517 aa)
     
        0.867
101262861
annotation not available (937 aa)
     
        0.864
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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