STRINGSTRING
Solyc01g107420.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g107420.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g107420.2.1Uncharacterized protein (104 aa)    
Predicted Functional Partners:
Solyc01g006110.2.1
Uncharacterized protein (405 aa)
       
 
  0.946
PP2Ac1
Serine/threonine-protein phosphatase (306 aa)
       
 
  0.862
Solyc01g073650.2.1
Serine/threonine-protein phosphatase (312 aa)
       
 
  0.862
Solyc01g034020.2.1
Serine/threonine-protein phosphatase (306 aa)
       
 
  0.862
PP2Ac2
Serine/threonine-protein phosphatase (306 aa)
       
 
  0.862
Solyc01g005950.2.1
Serine/threonine-protein phosphatase (313 aa)
       
 
  0.862
Solyc11g069490.1.1
Uncharacterized protein (847 aa)
       
 
  0.858
Solyc06g075160.2.1
Uncharacterized protein (842 aa)
       
 
  0.858
Solyc02g069780.2.1
Uncharacterized protein (784 aa)
       
 
  0.858
Solyc01g087180.2.1
Uncharacterized protein (163 aa)
       
 
  0.858
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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