STRINGSTRING
Solyc01g107640.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g107640.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g107640.2.1Uncharacterized protein (283 aa)    
Predicted Functional Partners:
Solyc05g054720.2.1
Uncharacterized protein (271 aa)
   
     
  0.694
Solyc04g076740.2.1
Uncharacterized protein (271 aa)
   
     
  0.677
Solyc11g008980.1.1
Uncharacterized protein (204 aa)
   
   
  0.516
Solyc08g068570.2.1
Uncharacterized protein (498 aa)
   
          0.496
Solyc03g051810.2.1
Uncharacterized protein (333 aa)
   
        0.495
Solyc02g090020.2.1
Uncharacterized protein (248 aa)
   
        0.488
Solyc06g054110.1.1
Uncharacterized protein (170 aa)
   
          0.482
Solyc05g013480.2.1
Uncharacterized protein (353 aa)
   
          0.481
Solyc08g061580.2.1
Uncharacterized protein (135 aa)
   
          0.478
Solyc05g006440.2.1
Uncharacterized protein (197 aa)
   
          0.478
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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