STRINGSTRING
CycD3;2 protein (Solanum lycopersicum) - STRING interaction network
CycD3 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CycD3;2CycD3;2 protein (364 aa)    
Predicted Functional Partners:
cdc2A-1
Cyclin-dependent protein kinase p34cdc2 (294 aa)
       
  0.996
Solyc11g070140.1.1
Uncharacterized protein (294 aa)
       
  0.985
RBR1
Retinoblastoma-related protein 1 (1018 aa)
     
  0.945
SlCKX3
Cytokinin oxidase/dehydrogenase 3 (531 aa)
           
  0.911
Solyc10g005260.2.1
Uncharacterized protein (411 aa)
       
      0.900
Solyc07g064510.2.1
Uncharacterized protein (410 aa)
       
      0.900
Solyc05g056510.2.1
Uncharacterized protein (342 aa)
       
      0.900
Solyc03g031720.2.1
Uncharacterized protein (405 aa)
       
      0.900
Solyc02g080420.2.1
Uncharacterized protein (413 aa)
       
      0.900
cdkB1
B1-type cyclin dependent kinase (303 aa)
     
  0.884
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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