STRINGSTRING
Solyc01g107790.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g107790.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g107790.2.1Uncharacterized protein (394 aa)    
Predicted Functional Partners:
Solyc01g103850.2.1
Uncharacterized protein (330 aa)
           
  0.533
Solyc12g005610.1.1
Uncharacterized protein (328 aa)
   
          0.525
Solyc10g012360.1.1
Uncharacterized protein (222 aa)
   
          0.525
Solyc01g107670.2.1
Uncharacterized protein (382 aa)
   
          0.521
Solyc01g014150.1.1
Uncharacterized protein (219 aa)
   
          0.520
Solyc06g033960.1.1
Uncharacterized protein (148 aa)
   
          0.518
Solyc01g009810.2.1
Uncharacterized protein (198 aa)
   
          0.517
Solyc01g014130.1.1
Uncharacterized protein (113 aa)
   
          0.516
Solyc11g016930.1.1
Uncharacterized protein (197 aa)
   
          0.515
Solyc01g014020.1.1
Uncharacterized protein (210 aa)
   
          0.508
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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