STRINGSTRING
Solyc01g108030.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g108030.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g108030.2.1Uncharacterized protein (570 aa)    
Predicted Functional Partners:
BCCP
Biotin carboxyl carrier protein of acetyl-CoA carboxylase (734 aa)
 
  0.998
Solyc11g069180.1.1
Uncharacterized protein (412 aa)
 
 
  0.985
Solyc06g073560.2.1
Uncharacterized protein (412 aa)
 
 
  0.984
Solyc08g078130.2.1
Uncharacterized protein (311 aa)
   
 
  0.967
Solyc05g054370.2.1
Uncharacterized protein (829 aa)
     
 
    0.901
Solyc01g066310.2.1
Uncharacterized protein (828 aa)
     
 
    0.901
Solyc12g099440.1.1
Uncharacterized protein (727 aa)
   
 
  0.880
Solyc12g007170.1.1
Uncharacterized protein (724 aa)
   
 
  0.880
Solyc08g068390.2.1
Uncharacterized protein (710 aa)
   
 
  0.880
Solyc07g019670.2.1
Uncharacterized protein (723 aa)
   
 
  0.880
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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