STRINGSTRING
Solyc01g108070.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g108070.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g108070.2.1Uncharacterized protein (406 aa)    
Predicted Functional Partners:
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
     
      0.798
Solyc10g083650.1.1
Uncharacterized protein (228 aa)
     
      0.721
TPx1
Thioredoxin peroxidase 1 (162 aa)
     
      0.721
Solyc01g079820.2.1
Uncharacterized protein (190 aa)
     
      0.721
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
 
  0.714
Solyc10g082030.1.1
Uncharacterized protein (267 aa)
   
 
  0.686
Solyc01g007740.2.1
Uncharacterized protein (267 aa)
   
 
  0.686
Solyc03g096040.2.1
Uncharacterized protein (219 aa)
   
 
  0.685
Solyc02g080040.2.1
Uncharacterized protein (445 aa)
       
 
  0.656
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
 
  0.565
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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