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Solyc01g108190.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g108190.2.1" - Calcium-binding EF-hand family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g108190.2.1Calcium-binding EF-hand family protein (185 aa)    
Predicted Functional Partners:
Solyc11g072850.1.1
CCT motif family protein (303 aa)
           
  0.851
101267960
Kinesin-like calmodulin-binding protein (ZWICHEL); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (1265 aa)
       
 
  0.776
Solyc06g052040.2.1
Calcium-binding EF hand family protein (160 aa)
     
 
  0.766
101256940
annotation not available (1375 aa)
       
 
  0.743
101244201
Uncharacterized protein; Two-pore channel 1 (739 aa)
     
 
  0.739
Solyc11g018800.1.1
annotation not available (319 aa)
           
  0.679
101260202
Calcium-binding EF-hand family protein (249 aa)
           
  0.661
101244868
Auxin-like 1 protein (1511 aa)
       
 
  0.656
101246440
annotation not available (857 aa)
       
 
  0.632
Wfi1
Uncharacterized protein; Whitefly-induced gp91-phox (938 aa)
       
 
  0.632
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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