STRINGSTRING
Solyc01g108600.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g108600.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g108600.2.1Uncharacterized protein (1072 aa)    
Predicted Functional Partners:
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
     
      0.885
Solyc12g009410.1.1
Pyruvate dehydrogenase E1 component subunit alpha ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (440 aa)
       
      0.813
Solyc12g009400.1.1
Pyruvate dehydrogenase E1 component subunit alpha ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (440 aa)
       
      0.813
Solyc07g042920.1.1
Uncharacterized protein (285 aa)
       
      0.813
Solyc05g006520.2.1
Pyruvate dehydrogenase ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (391 aa)
       
      0.813
Solyc04g005080.2.1
Pyruvate dehydrogenase E1 component subunit alpha ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (391 aa)
       
      0.813
Solyc06g068280.2.1
Uncharacterized protein (595 aa)
     
      0.793
Solyc03g117440.2.1
Uncharacterized protein (595 aa)
     
      0.793
Solyc03g096040.2.1
Uncharacterized protein (219 aa)
     
      0.720
Solyc11g017250.1.1
Uncharacterized protein (468 aa)
     
      0.655
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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