STRINGSTRING
nii1 protein (Solanum lycopersicum) - STRING interaction network
"nii1" - Nitrite reductase in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nii1Nitrite reductase (587 aa)    
Predicted Functional Partners:
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
 
  0.973
Solyc07g019460.2.1
NADPH--cytochrome P450 reductase ; This enzyme is required for electron transfer from NADP to cytochrome P450 (715 aa)
   
  0.963
Solyc04g076380.2.1
NADPH--cytochrome P450 reductase ; This enzyme is required for electron transfer from NADP to cytochrome P450 (686 aa)
   
  0.963
Solyc02g083810.2.1
Ferredoxin--NADP reductase (370 aa)
   
  0.963
Solyc02g062130.2.1
Ferredoxin--NADP reductase (362 aa)
   
  0.963
Solyc02g024050.2.1
Ferredoxin--NADP reductase (374 aa)
   
  0.963
Solyc11g069750.1.1
Uncharacterized protein (525 aa)
   
 
  0.957
Solyc06g010250.2.1
Uncharacterized protein (498 aa)
   
 
  0.957
Solyc02g067790.2.1
Uncharacterized protein (460 aa)
   
 
  0.957
GS1
Glutamine synthetase (354 aa)
         
  0.957
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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