STRINGSTRING
Solyc01g109080.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g109080.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g109080.2.1Uncharacterized protein (3719 aa)    
Predicted Functional Partners:
Solyc10g076270.1.1
Uncharacterized protein (616 aa)
     
  0.982
Solyc10g076260.1.1
Uncharacterized protein (542 aa)
     
  0.982
Solyc09g014780.2.1
Uncharacterized protein (1353 aa)
     
  0.982
Solyc03g059310.2.1
Uncharacterized protein (234 aa)
       
  0.974
Solyc10g074930.1.1
Uncharacterized protein (475 aa)
     
  0.965
Solyc06g071210.2.1
Putative ribosomal-protein S6 kinase-like protein (466 aa)
     
  0.965
Solyc03g095510.2.1
Uncharacterized protein (463 aa)
     
  0.965
CIP3
Peptidyl-prolyl cis-trans isomerase (112 aa)
       
  0.952
Solyc05g018300.2.1
Uncharacterized protein (1080 aa)
     
 
  0.950
Solyc04g012170.2.1
Uncharacterized protein (1516 aa)
     
  0.940
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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