STRINGSTRING
Solyc01g109180.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g109180.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g109180.2.1Uncharacterized protein (659 aa)    
Predicted Functional Partners:
Solyc12g006930.1.1
Uncharacterized protein (421 aa)
         
  0.900
Solyc04g055120.2.1
Uncharacterized protein (1344 aa)
     
 
  0.880
Solyc11g018580.1.1
Uncharacterized protein (610 aa)
   
 
0.850
Solyc07g045290.2.1
Uncharacterized protein (726 aa)
   
 
0.847
Solyc09g092450.2.1
Uncharacterized protein (723 aa)
   
   
 
0.832
Solyc10g079770.1.1
Uncharacterized protein (445 aa)
   
 
  0.812
Solyc10g079410.1.1
Uncharacterized protein (826 aa)
   
 
  0.812
Solyc09g075770.1.1
Uncharacterized protein (698 aa)
   
   
 
0.810
Solyc01g099100.2.1
Uncharacterized protein (696 aa)
   
   
0.809
Solyc08g078260.1.1
Uncharacterized protein (300 aa)
         
  0.806
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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