STRINGSTRING
Solyc01g109220.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g109220.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g109220.2.1Uncharacterized protein (54 aa)    
Predicted Functional Partners:
Solyc03g115030.2.1
Uncharacterized protein (54 aa)
     
   
  0.580
Solyc10g086510.1.1
Uncharacterized protein (93 aa)
     
   
  0.552
Solyc06g072600.2.1
Uncharacterized protein (78 aa)
     
   
  0.500
Solyc08g048070.1.1
Uncharacterized protein (67 aa)
     
   
  0.463
TIM10
Small zinc finger-like protein (81 aa)
     
   
  0.461
Solyc08g083380.2.1
Uncharacterized protein (88 aa)
     
   
  0.458
Solyc06g082800.2.1
Uncharacterized protein (312 aa)
     
   
  0.456
Solyc06g007710.2.1
Uncharacterized protein (314 aa)
     
   
  0.456
Solyc03g097640.2.1
Uncharacterized protein (76 aa)
     
   
  0.448
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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