STRINGSTRING
Solyc01g109330.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g109330.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g109330.2.1Uncharacterized protein (459 aa)    
Predicted Functional Partners:
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
   
   
  0.591
Solyc04g016010.2.1
Uncharacterized protein (537 aa)
   
   
  0.591
Solyc07g054820.2.1
Uncharacterized protein (250 aa)
   
        0.549
Solyc02g062350.2.1
Uncharacterized protein (270 aa)
   
        0.542
Solyc09g083150.2.1
Uncharacterized protein (253 aa)
   
        0.531
Solyc01g111750.2.1
Uncharacterized protein (305 aa)
   
          0.524
Solyc03g007830.2.1
Uncharacterized protein (177 aa)
   
          0.517
Solyc11g071890.1.1
Uncharacterized protein (360 aa)
   
        0.516
Solyc07g007280.2.1
Uncharacterized protein (251 aa)
   
        0.516
Solyc02g082030.2.1
Uncharacterized protein (388 aa)
 
          0.516
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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