STRINGSTRING
Solyc01g109400.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g109400.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g109400.2.1Uncharacterized protein (241 aa)    
Predicted Functional Partners:
Solyc12g019010.1.1
Uncharacterized protein (256 aa)
       
    0.901
Solyc02g070540.2.1
Uncharacterized protein (391 aa)
           
  0.457
Solyc12g095800.1.1
Uncharacterized protein (394 aa)
   
   
  0.444
Solyc01g109890.2.1
Uncharacterized protein (338 aa)
   
   
  0.444
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
           
  0.436
Solyc12g096760.1.1
Uncharacterized protein (343 aa)
     
        0.424
Solyc12g010970.1.1
Uncharacterized protein (202 aa)
     
        0.424
Solyc12g010960.1.1
Uncharacterized protein (151 aa)
     
        0.424
Solyc12g010950.1.1
Uncharacterized protein (346 aa)
     
        0.424
Solyc11g030720.1.1
Uncharacterized protein (344 aa)
     
        0.424
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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