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STRINGSTRING
101265486 protein (Solanum lycopersicum) - STRING interaction network
"101265486" - DNA-binding family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101265486DNA-binding family protein (945 aa)    
Predicted Functional Partners:
101260909
Actin-related protein 4; Belongs to the actin family (435 aa)
     
 
  0.947
101264507
annotation not available (526 aa)
     
 
  0.926
101248354
annotation not available (544 aa)
     
 
  0.926
Solyc11g013430.1.1
annotation not available (150 aa)
     
 
  0.915
Solyc11g013410.1.1
annotation not available (94 aa)
     
 
  0.915
Solyc11g013400.1.1
annotation not available (209 aa)
     
 
  0.915
Solyc11g062010.1.1
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (2667 aa)
     
 
  0.909
101245796
Transcription regulatory protein SNF2, putative (2236 aa)
     
 
  0.885
Solyc01g079700.2.1
annotation not available (151 aa)
     
 
  0.885
SlCHR1
annotation not available (995 aa)
     
 
  0.885
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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