STRINGSTRING
Solyc01g109560.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g109560.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g109560.2.1Uncharacterized protein (377 aa)    
Predicted Functional Partners:
GPA1
Guanine nucleotide-binding protein alpha-1 subunit ; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems (384 aa)
     
  0.982
Solyc02g090160.2.1
Uncharacterized protein (974 aa)
     
  0.980
Solyc08g076160.2.1
Uncharacterized protein (837 aa)
     
  0.980
Solyc08g005310.2.1
Uncharacterized protein (1273 aa)
     
  0.980
Solyc01g109110.2.1
Uncharacterized protein (903 aa)
     
  0.980
Solyc05g018300.2.1
Uncharacterized protein (1080 aa)
     
  0.910
Solyc07g007430.2.1
Palmitoyltransferase (631 aa)
     
 
  0.900
Solyc01g106440.2.1
Palmitoyltransferase (542 aa)
     
 
  0.900
Solyc09g082940.2.1
Uncharacterized protein (99 aa)
       
 
  0.845
mpka1;1
Mitogen-activated protein kinase 1 (396 aa)
     
  0.823
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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