STRINGSTRING
Solyc01g109620.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g109620.2.1" - Uncharacterized protein in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
Solyc01g109620.2.1Uncharacterized protein (229 aa)    
Predicted Functional Partners:
Solyc08g065550.1.1
Uncharacterized protein (80 aa)
 
  0.998
Solyc00g019950.1.1
Annotation not available (190 aa)
 
  0.998
Solyc08g065620.1.1
Uncharacterized protein (163 aa)
   
  0.997
Solyc08g029250.1.1
Uncharacterized protein (118 aa)
   
  0.997
Solyc03g061560.1.1
Uncharacterized protein (148 aa)
   
  0.997
Solyc01g056470.1.1
Uncharacterized protein (183 aa)
   
  0.997
Solyc01g020470.1.1
Uncharacterized protein (110 aa)
   
  0.997
ndhJ
NAD(P)H-quinone oxidoreductase subunit J, chloroplastic ; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (158 aa)
   
  0.997
Solyc11g070030.1.1
Uncharacterized protein (213 aa)
 
  0.997
ndhK
NAD(P)H-quinone oxidoreductase subunit K, chloroplastic ; NDH shuttles electrons from NAD(P)H-plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (225 aa)
 
  0.997
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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