STRINGSTRING
Solyc01g109750.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g109750.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g109750.2.1Uncharacterized protein (280 aa)    
Predicted Functional Partners:
Solyc06g069570.2.1
Uncharacterized protein (306 aa)
     
  0.962
Solyc05g012520.2.1
Uncharacterized protein (248 aa)
     
  0.962
Solyc03g115470.2.1
Uncharacterized protein (343 aa)
     
  0.962
Solyc08g079520.2.1
Uncharacterized protein (666 aa)
       
  0.961
Solyc01g091300.2.1
Uncharacterized protein (525 aa)
       
  0.961
Solyc01g091290.2.1
Uncharacterized protein (186 aa)
       
  0.961
Solyc06g050770.2.1
Uncharacterized protein (289 aa)
     
 
  0.940
Solyc05g052310.2.1
Uncharacterized protein (243 aa)
     
 
  0.940
Solyc07g005200.2.1
Uncharacterized protein (199 aa)
     
  0.915
Solyc12g049420.1.1
Uncharacterized protein (218 aa)
     
  0.871
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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