STRINGSTRING
Solyc01g109990.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g109990.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g109990.2.1Uncharacterized protein (1012 aa)    
Predicted Functional Partners:
Solyc01g096800.2.1
Uncharacterized protein (345 aa)
     
      0.997
Solyc12g015710.1.1
Uncharacterized protein (564 aa)
     
 
  0.997
Solyc07g052110.2.1
Uncharacterized protein (706 aa)
     
 
  0.997
Solyc07g045070.2.1
Uncharacterized protein (611 aa)
     
 
  0.997
Solyc11g066630.1.1
Uncharacterized protein (145 aa)
     
 
  0.996
Solyc06g074720.2.1
Uncharacterized protein (219 aa)
     
 
  0.996
Solyc07g047670.2.1
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (603 aa)
     
 
  0.995
Solyc07g042380.2.1
Uncharacterized protein (1248 aa)
     
 
  0.995
Solyc04g015940.2.1
Uncharacterized protein (1162 aa)
     
 
  0.995
Solyc04g081580.2.1
Uncharacterized protein (744 aa)
     
 
  0.994
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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