• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc01g110050.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g110050.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g110050.1.1annotation not available (432 aa)    
Predicted Functional Partners:
101254135
Uncharacterized protein; NAD(P)-linked oxidoreductase superfamily protein (321 aa)
           
  0.573
Solyc04g016490.2.1
Uncharacterized protein; Purple acid phosphatase 16 (362 aa)
           
  0.522
101253766
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer (335 aa)
           
  0.516
101261874
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (1007 aa)
   
   
  0.476
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
   
 
  0.416
SAP2
Stress-associated protein 2 (170 aa)
     
   
  0.407
Solyc01g086970.2.1
Stress-associated protein 4 (138 aa)
     
   
  0.407
101266060
Stress-associated protein 3 (171 aa)
     
   
  0.407
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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