STRINGSTRING
Solyc01g110340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc01g110340.2.1" - Endoglucanase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc01g110340.2.1Endoglucanase (496 aa)    
Predicted Functional Partners:
Solyc12g040640.1.1
Uncharacterized protein (504 aa)
         
    0.900
Solyc11g071640.1.1
Uncharacterized protein (629 aa)
         
    0.900
Solyc11g008720.1.1
Beta-glucosidase (504 aa)
         
    0.900
Solyc10g045240.1.1
Uncharacterized protein (512 aa)
         
    0.900
Solyc09g075070.2.1
Uncharacterized protein (521 aa)
         
    0.900
Solyc09g075060.2.1
Uncharacterized protein (504 aa)
         
    0.900
Solyc08g044510.2.1
Uncharacterized protein (511 aa)
         
    0.900
Solyc08g042020.1.1
Uncharacterized protein (203 aa)
         
    0.900
Solyc07g063880.2.1
Uncharacterized protein (506 aa)
         
    0.900
Solyc07g063390.2.1
Uncharacterized protein (538 aa)
         
    0.900
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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